Entering edit mode
4.8 years ago
milwaukee
•
0
Dear Biostars community,
I'm working with Ion Torrent data and I'm aiming to filter indels in result .vcf files.
So, I've read these articles:
- https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0045798
- https://www.ncbi.nlm.nih.gov/pubmed/24962530
and in these articles are used parameters B-AlleleFrequency (BAF) and VARiation of the Width of gaps and inserts (VARW) per indel position.
But there is no explanation on how to get these parameters.
Could you please help me?
