why some genotyped snps are lost after imputation
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21 months ago
lilingjoyo ▴ 40

Hallo everyone,

I'm using IMPUTE2 for genotype data phasing and imputing. But I found that lots genotyped variants are lost after imputation. Anyone had same phenomenon before? Do you know the reason?

Any idea is welcomed.

imute2 genotype • 406 views
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