Question: MISO eventID conversion to hg38
0
gravatar for amir.manzour
12 months ago by
amir.manzour0 wrote:

Hello

I had a question about the necessity of converting eventIDs

The GFF3 and indexing can be converted to hg38 coordinates: https://github.com/roryk/miso-hg38-events but the eventIDs themselves (ex: chr....@chr...@...) stay as they are in the old version.

When running on hg38-mapped bam files, and hg38 indexed annotations as made above, would MISO care if the eventIDs are still from an older version (eg. hg19)?

Would anyone know if these eventIDs treated as mere variables or is their coordinates taken into account as well.

rna-seq • 303 views
ADD COMMENTlink written 12 months ago by amir.manzour0
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