Monocle3 bin cells along pseudotime and do differential expression
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4.8 years ago

I want to bin my cells into, for example, 10 bins along the Pseudotime. Then, I will like to perform differential expression on these bins. Specifically, I will like to identify signatures/markers for these bins. I am using Monocle3. How can I do this?

monocle3 single cell RNA sequencing R RNA-Seq • 1.4k views
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