Hey,
so Perseus (a companion tool to MaxQuant) comes with a linear motifs file (conf/motifs.txt
) that contains lines like this:
Akt kinase substrate motif "R,X,R,X,X" ST FL
LKB1 kinase substrate motif "L,R" T
....
I was wondering if anyone has any idea what their motif table is based on or what the obvious central DB / online resource for this kind of data is (ELM ?). I tried their Google Group but have not gotten an answer there.
Since it is delivered with Perseus and not something you download yourself like e.g. PSP data I just wanna make sure I know what I am dealing with in terms of annotation.
cheers