I like the way vg viz visualises the variant graph, but it seems I arrived at a point where it's not working anymore... I have a grpah constructed with seqwish from five whole bacterial genomes. Converting to VG format and creating an XG index worked just fine, but the SVG created by vg viz is empty. Is tehre a limit to what this tool can do, or is it a different problem somehow?
Thanks in advance,