OR in plink2 GLM
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4.3 years ago
mel22 ▴ 100

Hi, I am using plink2 for my analysis, I used 2 functions :

--glm

and

--glm interaction

I have case control data, but I can't understand the meaning of the OR with plink under additive model, what is the reference? OR of which subjects against which subjects ? !

The same for OR interactions, It's also under additive model but what is exactly the meaning of ADDxCOV1 (numeric variable) ?

Thanks for your help

SNP plink • 1.0k views
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Thanks Christopher !

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