(Cytoscape) What is app for miRNA-mRNA interaction?
1
0
Entering edit mode
2.6 years ago
hslee97 • 0

Hello, I studied cytoscape's manual recently. I want to analyze several miRNAs with mRNAs. In addition, I have only name list that contains miRNAs and mRNAs. So, Cytoscape app that contains online-database is very important. What app is for analyze miRNAs with mRNAs?

Cytoscape • 592 views
ADD COMMENT
1
Entering edit mode
2.6 years ago
scooter ▴ 590

I'm not aware of a database that specifically has miRNA-mRNA interactions. CyTargetLinker might be helpful if you have a starting network and you want to extend it with regulatory information (e.g. miRNA), but I don't know of any apps beyond that. If you are aware of a database that has what you want, we might be able to guide you in downloading results from it into Cytoscape.

-- scooter

ADD COMMENT

Login before adding your answer.

Traffic: 1804 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6