Question: Main Methods Used To Predict Functional Annotations In Go
4
gravatar for 9606
7.8 years ago by
9606320
Italy
9606320 wrote:

Can someone provide me some information about the main method used to predict the inferred electronic annotations in Gene Ontology?

annotation prediction • 1.2k views
ADD COMMENTlink written 7.8 years ago by 9606320
4
gravatar for Philipp Bayer
7.8 years ago by
Philipp Bayer6.6k
Australia/Perth/UWA
Philipp Bayer6.6k wrote:

This paper ( http://bib.oxfordjournals.org/content/12/6/723.full ) says that the majority of IEA-annotations come from the GOA-database annotation pipeline, which is based on four sources: UniProtKB/Swiss-Prot Keywords2GO, EC2GO, HAMAP2GO and InterPro2GO. For more information, check out their paper: http://nar.oxfordjournals.org/content/37/suppl_1/D396.full

ADD COMMENTlink written 7.8 years ago by Philipp Bayer6.6k
2
gravatar for Emily Dimmer
7.8 years ago by
Emily Dimmer70
Emily Dimmer70 wrote:

Phillip is spot on in his reply. You can see the breakdown of annotations by different sources/methods in the latest UniProt release here: http://www.ebi.ac.uk/GOA/uniprot_release.html

ADD COMMENTlink written 7.8 years ago by Emily Dimmer70
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