Question: Is there a single cell RNAseq equivalent of GTEx or TCGA?
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gravatar for david.peeney
7 months ago by
david.peeney30
david.peeney30 wrote:

Hi all...Is there a single cell RNAseq equivalent of GTEx or TCGA? Or do I need to find individual studies and obtain data the long way!

gtex rna-seq • 340 views
ADD COMMENTlink modified 7 months ago by igor11k • written 7 months ago by david.peeney30
1
gravatar for igor
7 months ago by
igor11k
United States
igor11k wrote:

Some people would say GTEx and TCGA are very different. I assume what you are looking for is sequencing data across multiple organs. The closest on the single-cell level is the Human Cell Atlas: https://data.humancellatlas.org/

ADD COMMENTlink written 7 months ago by igor11k

Thanks... by similarity to TCGA/GTEx, I was looking for a repository of raw/processed data that can be accessed

ADD REPLYlink written 7 months ago by david.peeney30
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