Off topic:DEG from RPKM...
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4.0 years ago

Hi,

I have downloaded a RPKM table from GEO and I couldn't have access to the read files as they were private. I see different methods for discovering deferentially expressed genes consider genes with RPKM>1 and adjusted p value<0.05 as DEG. However, the table that I have downloaded doesn't provide the p values and the columns just include samples. How can I find the deferentially expressed genes with such a table?

RNA-Seq • 596 views
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