Read fasta file using mobile app

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5.5 years ago

Tasneemmustafamalek • 0

I work on app for making the user upload fasta files

and doing align by using pairwise alignment and multiple alignment, but the fasta files i have on my mobile can't work on.
how can i access fasta files in my app
what's the library which could read fasta files?

alignment sequence fasta • 2.1k views

ADD COMMENT • link updated 5.5 years ago by zx8754 12k • written 5.5 years ago by Tasneemmustafamalek • 0

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First, what do you mean by "mobile", what type of device are you talking about? I am not sure what you mean by accessing the fasta file, I would need more details.

Regarding the library, if you are familiar with python (and you work on Windows, Mac or Linux), you can use the Biopython library with Bio.SeqIO.

You have a good tutorial here.

ADD REPLY • link 5.5 years ago by lumal29 ▴ 80

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i need to align 2 sequences one i store in database and another one sequence alignment? what is the code of one sequence alignment ?

ADD REPLY • link 5.4 years ago by Tasneemmustafamalek • 0

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