Entering edit mode
3.9 years ago
pthom010
▴
40
I recently completed a de novo sequencing project and want to do DE analysis on my reads. I would like to remove duplicate reads from my transcriptome and was wondering if anybody had any suggestions for software to use. I'm aware of CD-HIT and iAssembler but was curious if there was anything else out there. Also, do you recommend running more than one of these or should CD-HIT suffice?
