Calculating Effective Population Size from One Individual
0
0
Entering edit mode
3.8 years ago
jsweet6 • 0

Hi,

I am looking to calculate effective population size from SNP data called from next generation sequencing in vcf/Plink format. I have tried but cannot seem to find any programme that will allow you to work on one individual. Could someone point me in the direction of a programme that allows this?

Thank you

Ne SNP • 789 views
ADD COMMENT
0
Entering edit mode

psmc seems to do that https://github.com/lh3/psmc

ADD REPLY

Login before adding your answer.

Traffic: 1635 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6