Deleted:How to confirm NTC template contamination in WGS data?
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3.8 years ago
ej6474 ▴ 10

I have WGS data for many viral, few of which show that the no template-control has a signal and some reads. What are some ways QC ways of confirming that it is indeed due to template contamination? Could I BLAST it to a sample to see if there is alignment, or should I see it on a depth per read plot?

genome sequencing next-gen alignment • 161 views
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