Question: How to confirm NTC template contamination in WGS data?
gravatar for esha.joshi
2 days ago by
esha.joshi0 wrote:

I have WGS data for many viral, few of which show that the no template-control has a signal and some reads. What are some ways QC ways of confirming that it is indeed due to template contamination? Could I BLAST it to a sample to see if there is alignment, or should I see it on a depth per read plot?

ADD COMMENTlink written 2 days ago by esha.joshi0
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 932 users visited in the last hour