Question: How to confirm NTC template contamination in WGS data?
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2 days ago by
esha.joshi0
esha.joshi0 wrote:

I have WGS data for many viral, few of which show that the no template-control has a signal and some reads. What are some ways QC ways of confirming that it is indeed due to template contamination? Could I BLAST it to a sample to see if there is alignment, or should I see it on a depth per read plot?

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