Entering edit mode
3.8 years ago
mahejabeen.nidhi
▴
20
I am trying to install EGSEA however, I keep getting the following error
Error: package or namespace load failed for ‘EGSEA’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
there is no package called ‘mnormt’
I tried to install mnormt which resulted in a long list of warnings.
installing the source package ‘mnormt’
trying URL 'https://cran.rstudio.com/src/contrib/mnormt_2.0.1.tar.gz'
Content type 'application/x-gzip' length 50589 bytes (49 KB)
==================================================
downloaded 49 KB
* installing *source* package ‘mnormt’ ...
** package ‘mnormt’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c biv-nt.f -o biv-nt.o
biv-nt.f:371:11:
371 | hs = sign( one, dh - r*dk )
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
biv-nt.f:372:11:
372 | ks = sign( one, dk - r*dh )
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c mnormt_init.c -o mnormt_init.o
gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c sadmvnt.f -o sadmvnt.o
sadmvnt.f:977:3:
977 | 10 END DO
| 1
Warning: Label 10 at (1) defined but not used [-Wunused-label]
sadmvnt.f:81:15:
81 | INFORM = MVNNIT( N, CORREL, LOWER, UPPER, INFIN, INFIS, D, E )
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
sadmvnt.f:218:38:
218 | IF ( MINCLS .LT. 0 ) SBRGNS = WORK(LENWRK)
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
sadmvnt.f:276:21:
276 | RGNCLS = RGNCLS*(MESH(DIVAXN)+1)/MESH(DIVAXN)
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
sadmvnt.f:277:21:
277 | NWRGNS = NWRGNS*(MESH(DIVAXN)+1)/MESH(DIVAXN)
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
sadmvnt.f:1275:24:
1275 | POINTS = PONTRS(SUBTMP)
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
sadmvnt.f:1276:24:
1276 | POINTP = PONTRS(SUBTMP+1)
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
sadmvnt.f:1284:21:
1284 | POINTS = PONTRS(SUBTMP)
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
sadmvnt.f:1304:21:
1304 | POINTS = PONTRS(SUBTMP)
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
sadmvnt.f:325:15:
325 | TOP = PONTRS(1)
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
sadmvnt.f:332:21:
332 | RGNCLS = RGNCLS*MESH(I)
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
sadmvnt.f:337:18:
337 | RGNCLS = RGNCLS*(MESH(DIVAXN)+1)/MESH(DIVAXN)
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
sadmvnt.f:1586:3:
1586 | 10 END DO
| 1
Warning: Label 10 at (1) defined but not used [-Wunused-label]
sadmvnt.f:1433:15:
1433 | INFORM = MVTNIT( N, NU, CORREL, LOWER, UPPER, INFIN, INFIS, D, E )
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
sadmvnt.f:1662:0:
1662 | & /( 1 + BMIN**2/(NU+I-1) )**( (NU+I-2)/TWO )
|
Warning: 'bmin' may be used uninitialized in this function [-Wmaybe-uninitialized]
sadmvnt.f:1659:0:
1659 | & /( 1 + AMIN**2/(NU+I-1) )**( (NU+I-2)/TWO )
|
Warning: 'amin' may be used uninitialized in this function [-Wmaybe-uninitialized]
sadmvnt.f:1128:0:
1128 | INTEGER S, IXCHNG, LXCHNG, I, L
|
Warning: 'lxchng' may be used uninitialized in this function [-Wmaybe-uninitialized]
sadmvnt.f:805:0:
805 | END
|
Warning: '__result_bvn' may be used uninitialized in this function [-Wmaybe-uninitialized]
sadmvnt.f:763:0:
763 | DOUBLE PRECISION FUNCTION BVN ( LOWER, UPPER, INFIN, CORREL )
|
note: '__result_bvn' was declared here
sadmvnt.f:1045:0:
1045 | IF ( INFI(I) .EQ. 0 ) Y(I) = BMIN
|
Warning: 'bmin' may be used uninitialized in this function [-Wmaybe-uninitialized]
sadmvnt.f:1046:0:
1046 | IF ( INFI(I) .EQ. 1 ) Y(I) = AMIN
|
Warning: 'amin' may be used uninitialized in this function [-Wmaybe-uninitialized]
gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c tvpack.f -o tvpack.o
tvpack.f:459:14:
459 | HS = SIGN( ONE, DH - R*DK )
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
tvpack.f:460:14:
460 | KS = SIGN( ONE, DK - R*DH )
| 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
tvpack.f:126:52:
126 | DOUBLE PRECISION ONE, ZRO, EPS, ZROS(3), HS(3), TVT
| 1
Warning: Unused variable 'hs' declared at (1) [-Wunused-variable]
tvpack.f:126:45:
126 | DOUBLE PRECISION ONE, ZRO, EPS, ZROS(3), HS(3), TVT
| 1
Warning: Unused variable 'zros' declared at (1) [-Wunused-variable]
tvpack.f:286:0:
286 | END
|
Warning: 'fin' may be used uninitialized in this function [-Wmaybe-uninitialized]
tvpack.f:262:0:
262 | DOUBLE PRECISION EI(NL), AI(NL), BI(NL), FI(NL), FIN, ERR, KRNRDT
|
note: 'fin' was declared here
clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o mnormt.so biv-nt.o mnormt_init.o sadmvnt.o tvpack.o -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin18/8.2.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin18/8.2.0'
ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
ld: library not found for -lgfortran
clang: error: linker command failed with exit code 1 (use -v to see invocation)
make: *** [mnormt.so] Error 1
ERROR: compilation failed for package ‘mnormt’
* removing ‘/Library/Frameworks/R.framework/Versions/4.0/Resources/library/mnormt’
Warning in install.packages :
installation of package ‘mnormt’ had non-zero exit status
The downloaded source packages are in
‘/private/var/folders/cc/w14vc6710qxd_v4snt40fl2c0000gn/T/RtmptqJ8vI/downloaded_packages’
