Where can I get the GTex equivalent to rnaseqv2 Level3 RSEM_genes?
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15 months ago
simplitia ▴ 70

Hi I want to compare TCGA lung cancer to normal lung in GTex. Currently I download expected_counts/raw counts from Gdac firehouse. My understanding is that this is from the Tcga Rnaseqv2 Level3 Data pipeline. However Gdac does not have GTex data. My question, do you know where I can download GTex that has been processed with the same pipeline? thanks!

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RNA-Seq tcga rsem • 395 views
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