Homer: removeOutOfBoundsReads.pl command cannot find chromosome size file
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14 months ago
rb56 ▴ 30

Hi, I'm using Homer for NGS analysis on USCS browser. I am using removeOutOfBoundsReads.pl command on the tag directories but I keep getting an error that Homer cannot find chromosome size file. I have tried installing homer and hg19 again, but this hasn't resolved the error

This is what the error looks like: https://ibb.co/NyMHdB1

next-gen RNA-Seq Homer ATAC Seq • 382 views
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Entering edit mode
14 months ago
rb56 ▴ 30

enter image description here

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