Question: (Closed) How do I correctly add chain ID to my pdb file?
0
gravatar for azeem839839
10 weeks ago by
Capital University of Science and Technology Islamabad Pakistan
azeem8398390 wrote:
ATOM      1  N   MET     1     -69.269  78.953 -91.441  1.00  0.00           N  
ATOM      2  CA  MET     1     -69.264  78.650 -92.891  1.00  0.00           C  
ATOM      4  C   MET     1     -69.371  79.939 -93.633  1.00  0.00           C  
ATOM      5  O   MET     1     -68.379  80.649 -93.799  1.00  0.00           O  
ATOM      3  CB  MET     1     -70.475  77.774 -93.251  1.00  0.00           C  
ATOM      6  CG  MET     1     -70.505  76.455 -92.477  1.00  0.00           C  
ATOM      7  SD  MET     1     -69.115  75.332 -92.806  1.00  0.00           S  
ATOM      8  CE  MET     1     -69.473  74.270 -91.377  1.00  0.00           C  
ATOM      9  N   ASP     2     -70.583  80.284 -94.111  1.00  0.00           N  
ATOM     10  CA  ASP     2     -70.688  81.539 -94.789  1.00  0.00           C  
ATOM     12  C   ASP     2     -70.661  82.602 -93.737  1.00  0.00           C  
ATOM     13  O   ASP     2     -71.088  82.377 -92.606  1.00  0.00           O  
ATOM     11  CB  ASP     2     -71.963  81.733 -95.626  1.00  0.00           C  
ATOM     14  CG  ASP     2     -71.691  82.908 -96.557  1.00  0.00           C  
ATOM     15  OD1 ASP     2     -70.569  82.953 -97.130  1.00  0.00           O  
ATOM     16  OD2 ASP     2     -72.598  83.768 -96.717  1.00  0.00           O1-
ATOM     17  N   HIS     3     -70.129  83.791 -94.077  1.00  0.00           N  
ATOM     18  CA  HIS     3     -70.045  84.846 -93.110  1.00  0.00           C  
ATOM     20  C   HIS     3     -71.342  85.581 -93.094  1.00  0.00           C  
ATOM     21  O   HIS     3     -72.113  85.574 -94.052  1.00  0.00           O  
ATOM     19  CB  HIS     3     -68.925  85.865 -93.404  1.00  0.00           C  
ATOM     23  CG  HIS     3     -68.749  86.908 -92.336  1.00  0.00           C  
ATOM     25  CD2 HIS     3     -67.998  86.879 -91.200  1.00  0.00           C  
ATOM     22  ND1 HIS     3     -69.357  88.144 -92.351  1.00  0.00           N  
ATOM     26  CE1 HIS     3     -68.947  88.797 -91.234  1.00  0.00           C  
ATOM     24  NE2 HIS     3     -68.121  88.068 -90.504  1.00  0.00           N
pdb chain id • 150 views
ADD COMMENTlink modified 10 weeks ago by Mensur Dlakic7.3k • written 10 weeks ago by azeem8398390

Some one help me please

ADD REPLYlink written 10 weeks ago by azeem8398390

Adding an answer to push your urgency a minute after adding a post is rude. Please do not do this.

Also, you've added zero detail to your question. Please read: https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1002202

ADD REPLYlink modified 10 weeks ago • written 10 weeks ago by _r_am31k

I wouldn't exactly call this rude, but it is definitely a turn-off when posters act as if their problems are greater than those of others. If you are in such a hurry to get an answer, I suggest searching the whole site first. The answer to your question was already available on Biostars.

ADD REPLYlink written 10 weeks ago by Mensur Dlakic7.3k

Literally a minute after creating the post, Mensur? I'd say that's definitely rude - it's almost a tantrum.

ADD REPLYlink modified 10 weeks ago • written 10 weeks ago by _r_am31k

Literally a minute after creating the post, Mensur? I'd say that's definitely rude - it's almost a tantrum.

You seem to take some of these things personally, and seem to prefer assigning labels to posters and their actions. This is based on multiple observations and also from personal experience, because I was at the receiving end more than once.

Unless there is an unambiguous way to label someone's action - don't think that's the case here - I prefer to tell people how their actions make me feel. So in this case what the poster did is a turn-off for me. Every time you call someone rude based on posts that are similar to this one, that offends me, and I imagine it offends the posters as well. I think that in this case the poster may be called out for spamming, or for being inconsiderate, and probably several other things. Yet I don't see how asking for help multiple times is rude, even if it offends you or makes your job more difficult.

I suggest you consider the difference between typing:

Please do not add an answer just to push your urgency.

Versus:

Adding an answer to push your urgency a minute after adding a post is rude. Please do not do this.

I think both are communicating the same message, but one of them has the potential to offend the posters and alienate them when it comes to future participation.

ADD REPLYlink written 10 weeks ago by Mensur Dlakic7.3k

Appreciate the feedback. My take is that I criticize the action and ask that the user avoid it - I try my best to skip imperative sentences. Even here, I wanted the impact to be on the action, hence the "Please do not do this (previously mentioned rude action)". I take your point though, it is more annoying/spammy than rude.

ADD REPLYlink written 10 weeks ago by _r_am31k

Hello azeem839839!

Questions similar to yours can already be found at:

We have closed your question to allow us to keep similar content in the same thread.

If you disagree with this please tell us why in a reply below. We'll be happy to talk about it.

Cheers!

PS: Thank you for the heads up, Mensur.

ADD REPLYlink modified 10 weeks ago • written 10 weeks ago by _r_am31k
1
gravatar for Mensur Dlakic
10 weeks ago by
Mensur Dlakic7.3k
USA
Mensur Dlakic7.3k wrote:

This was already answered in this thread.

ADD COMMENTlink written 10 weeks ago by Mensur Dlakic7.3k
1

This seems to be the exact same question. Could it be an assignment question that multiple people following a course are seeing?

ADD REPLYlink written 10 weeks ago by _r_am31k
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