Question: Mapping clonotypes on UMAP
gravatar for roberts
7 weeks ago by
roberts30 wrote:

Hello! I have a suerat object and I would like to map the top 10 clonotypes in it. I am using the code

top10 <- head(VariableFeatures(Object$clonotype_id),10)

I keep getting the error, "Error in UseMethod(generic = "VariableFeatures", object = object) : no applicable method for 'VariableFeatures' applied to an object of class "factor"". Does anyone know how to pick out the top ten clonotypes? Thanks in advance!

seurat umap rna-seq clonotype R • 120 views
ADD COMMENTlink written 7 weeks ago by roberts30
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