GISTIC analysis input file error

Question

[AnnaW]

Hello everyone,

first time in my life I encountered the following error while running GISTIC GISTIC version 2.0.23

GISTIC 2.0 input error detected: Only one sample remains after noise filtering.

I have checked the log ratios. They are ok. Input file structure seems also ok. Does anyone have an idea what could be wrong?

Thanks!

[Ram]

You should post this on the gistic-forum: https://groups.google.com/u/2/a/broadinstitute.org/g/gistic-forum