Question: eQTL analysis using BGData in R
gravatar for evafinegan
6 weeks ago by
evafinegan0 wrote:


I have two datafiles, 1. gene expression matrix with genes in rows and samples in columns with respective FPKM values, and 2. SNP data (vcf file).

I want to do eQTL analysis using BGData package in R. I could not find any beginner tutorial about the same package on how to prepare the files for analysis. I would appreciate any help or any example about the same. Thank you!

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