Question: Pipeline For Amplicons Analysis
0
gravatar for konstantinkul
7.0 years ago by
Russian Federation
konstantinkul70 wrote:

Hi all! Could you recommend any pipelines for analysis of amplicons ? Is supposed that we will analyze the data from MiSeq (PE reads 2 x 150bp, file format fasta or fastq). I'll be thankful for any information.

miseq analysis pipeline • 2.4k views
ADD COMMENTlink modified 4.7 years ago by Biostar ♦♦ 20 • written 7.0 years ago by konstantinkul70
0
gravatar for Sean Davis
7.0 years ago by
Sean Davis25k
National Institutes of Health, Bethesda, MD
Sean Davis25k wrote:

Take a look at GATK from the Broad and Picard library for quality control.

ADD COMMENTlink written 7.0 years ago by Sean Davis25k

Thanks a lot I'll try !

ADD REPLYlink written 7.0 years ago by konstantinkul70
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