Entering edit mode
2.5 years ago
optimistsso4co3 ▴ 100
I get ~5% positive rate in all chromosomes, yet X has 13% positivity rate. What could be causing that? I'm performing plink --logistic with --xchr-model 2.
Edit: I replicated analysis separate for each sex and in males inflation disappears, while in females it prevails exactly as high.