Paired Tumor and Normal Sample for BRCA-Subtype
0
0
Entering edit mode
7 months ago

I have downloaded the paired tumor and normal sample for BRCA data using TCGAbiolinks. I have referred to the code in this A: Matched Paired Tumour-Normal DEA of BRCA using data downloaded using TCGAbiolink post. However, I want to further divide it to subtypes like LumA, Basal and Triple-Negative keeping the matched Ids. How can I do that?

TCGAbiolinks R TCGA • 229 views
ADD COMMENT
0
Entering edit mode

You can use tcgabiolinks to look up clinical information: TCGAbiolinks: Clinical data

ADD REPLY

Login before adding your answer.

Traffic: 1477 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6