Entering edit mode
3.7 years ago
demoraesdiogo2017
▴
110
Hello I have several Seurat objects I'm trying to merge. I ran the code:
BALF.big <- merge(C141, y = c(C142, C143, C144, C145, C146, C51, C52, C100, C148, C149, C152), add.cell.ids = c("C141", "C142", "C143", "C144", "C145", "C146", "C51", "C52", "C100", "C148", "C149", "C152"), project = "BALF")
and got the following error:
arguments imply differing number of rows: 33539, 33538
I am pretty stuck. The solutions I found were related to previous versions and don't seem to apply here. I think it refers to the number of features in each dataset. How can I make it ignore this?
Merging objects with different number of features should not cause errors, so it's referring to something else.
Have you tried with fewer objects? I would try to find the one that is causing the problem.