A list of plant (Arabidopsis, rice or maize) cell cycle genes for Seurat
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17 months ago
slbai00001 • 0

Hi,

I have some single-cell RNA sequencing data of maize. I want to use seurat to regression the effect of cell cycle genes. I have read some literature about the cell cycle of Arabidopsis and maize, but I don’t know how to define genes as S or G2M provides the CellCycleScoring method for seurat. I need the corresponding list of cell cycle and S or G2M or the principle of defining this information. The gene list can be Arabidopsis, rice, maize or any other plant.

Thanks.

single cell seurat cell cycle scRNA-seq • 384 views