is there a kind of package like Bio::Trace::ABIF in python?
1
0
Entering edit mode
3.6 years ago
schagas • 0

I would like to align (map to reference), edit and export .ab1 files. However, if there isnt a such tool in python, any other language suggestion?

abif sanger perl python • 1.2k views
ADD COMMENT
2
Entering edit mode
ADD COMMENT
0
Entering edit mode

Thanks Mrs Dlakic! but these tools just reading or parsing ab1 files.

ADD REPLY
1
Entering edit mode

After you extract the sequence and quality scores from .ab1 files, alignments can be made using BioPython's own alignment module. Or use any other alignment module implemented in python.

ADD REPLY

Login before adding your answer.

Traffic: 1224 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6