To construct the Venn diagram from Roary

Question

[BATMAN]

Hi, I wanted to ask a question about how to create a Venn Diagram from the Roary output using the query_pan_genome command.

If one has 3 groups A, B and C. To get the "unique" genes for each group the command would be: query_pan_genome -a difference or query_pan_genome -a complement ???

To obtain the shared genes between AB, AC and BC the command would be: query_pan_genome -a union or query_pan_genome -a intersection ???

Answer 1

[paola.l]

Hi, I wanted to do the same analysis. Have you found a solution?