Ion Variant Hunter

Question

[learnerforever]

Has anyone used stand-alone Variant calling tools Ion Variant Hunter on Torrent generated BAMs?

https://github.com/iontorrent/Ion-Variant-Hunter

Could you please post command line parameters used?

Thanks!

[diltsjeri]

You probably did this already, but did you try the Ion Community? http://lifetech-it.hosted.jivesoftware.com/index.jspa