Tea Pipeline For Hg19
0
0
Entering edit mode
9.2 years ago
mark.dunning ▴ 220

Hi all,

There is interest in our group for running the Tea pipeline on our cancer dataset

http://compbio.med.harvard.edu/Tea/

The package download seems to be setup for hg18, but our dataset was aligned to hg19. Has anyone tried running the pipeline on hg19 data? If so, could I get some pointers about how to modify the resources that the package comes bundled with.

Regards,

Mark

• 1.5k views
ADD COMMENT

Login before adding your answer.

Traffic: 1786 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6