Dna Motif Enrichment Search Using Gene Id
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11.4 years ago
hlzhang12 ▴ 20

I have a set of human genes, I want to know if this set of genes enrich any transcription factor and microRNA binding sites in their promoter and 3'UTR, comparing to the genome-wide background. This probably can be easily done by loading the promoter and 3'UTR sequence to some nice software suite, such as Amadeus. But can this be done even easier by just providing the gene ID, rather than the actual sequences downloaded from ENSEMBL?

motif transcription • 2.7k views
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