Question: Software / Pipeline For Affymetrix Genome-Wide Human Snp Array 6.0
gravatar for pmoney1
6.9 years ago by
pmoney180 wrote:


I'm wondering if anyone can recommend any software / pipeline for analysing Affymetrix Genome-Wide Human SNP Array 6.0. Preferrably something that does an integrative analysis of the SNP and CNV data. I tried using "Birdsuite" but gave up after about 6 hours of trying to install it.

affymetrix snp • 3.2k views
ADD COMMENTlink modified 6.9 years ago by Alex Paciorkowski3.4k • written 6.9 years ago by pmoney180
gravatar for Alex Paciorkowski
6.9 years ago by
Rochester, NY USA
Alex Paciorkowski3.4k wrote:

You can use PennCNV. Here's a tutorial. Or if you want to spend a lot of money you can use Nexus.

ADD COMMENTlink written 6.9 years ago by Alex Paciorkowski3.4k
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