I've downloaded "Conservation scores for alignments of 45 vertebrate genomes with Human" and "Conservation scores for alignments of primates genomes with Human" from UCSC in WigFix format.
I wanna extract scores for each position within a certain region and get an output in bedgraph format.
And score should be 0 when the position is not recorded in Wig file.
The output could be like:
Chrom Start End Score
I know bigWigToBedGraph can extract score from bigWig file. Is there any similar tool to extract wigFix file?
Or is there an alternative way to do it?
Thanks for help.