Question: Downloading Conservation Data For Genomegraphs
gravatar for Eric
6.5 years ago by
Eric90 wrote:

I have been using genomeGraphs in R and would like to analyze/visualize conservation scores for certain human genomic regions. In the vignette, phastCons scores are used for yeast, where the relevant script is

conserv <- yeastCons1[yeastCons1[,1] > minB & yeastCons1[,1] < maxB, ]

I am looking at human genomic data, want to look for selection along the primate lineage, and am not sure which file to download from here. As these are large files, it would be very helpful is someone could point me in the right direction.


R ucsc • 1.4k views
ADD COMMENTlink modified 5.7 years ago by Biostar ♦♦ 20 • written 6.5 years ago by Eric90
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