Gatk Variantrecalibrator Resources

Question

[Zev.Kronenberg]

I see that some resources are included with the GATK release, however I am looking for the false positive VCF (1000G_omni2.5.b37.sites.vcf) data.

Anyone know where this lives?

**ANSWER is wrong: ftp://ftp.broadinstitute.org/distribution/gsa/gatk_resources.tgz**

The gatk_resources.tgz does not have the 1000G_omni2.5.b37.sites.vcf

seems to be correct:

ftp://ftp.broadinstitute.org/bundle/2.5/b37/

[Zev.Kronenberg]

yeah - may have jumped the gun.... ftp.broadinstitute.org