Question: (Closed) Macs - Wiggle To Normalized Wiggle
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gravatar for Repineme
8.1 years ago by
Repineme110
Repineme110 wrote:

Is it possible to create a normalized wiggle file from MACS raw wiggle file ?

wiggle • 2.3k views
ADD COMMENTlink modified 8.1 years ago • written 8.1 years ago by Repineme110
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what's the difference between a 'normalized' and a 'raw' wiggle file ?

ADD REPLYlink written 8.1 years ago by Pierre Lindenbaum119k

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Hi usually MACS produce RAW wiggle file by counting reads in certain window. That's fine. Wiggle files from MACS should be also normalized by the sequencing depth in million reads. But I'm wondering how to do this in a simple way.

Any suggestions will be appreciated! Thanx

ADD REPLYlink written 8.1 years ago by Repineme110

Hello Repineme!

We believe that this post does not fit the main topic of this site.

Inactive for >2 years

For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with.

If you disagree please tell us why in a reply below, we'll be happy to talk about it.

Cheers!

ADD REPLYlink written 4.3 years ago by RamRS21k
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