Question: Semantic Similarity Between Go Terms Groups (G-Sesame Web Is Down)
0
gravatar for giulioferrero1
5.9 years ago by
giulioferrero10 wrote:

Hi.

For my research project recently i have to compute a semantic similarity between two groups of Gene ontology terms and my colleague suggested me to use G-Sesame algorithm for this analysis. However, the website is not available.

Do you know some other algorithm which i can exploit for this analysis?

Thanking you in advance.

Giulio

go ontology • 2.0k views
ADD COMMENTlink modified 5.5 years ago by Alf450 • written 5.9 years ago by giulioferrero10
1
gravatar for Alf
5.5 years ago by
Alf450
UK
Alf450 wrote:

You can use GOssTo (http://www.paccanarolab.org/gossto/) and try one of the already implemented semantic similarity measures (Resnik, Lin, Jiang, etc.), with or without the random walk contribution measure (Yang et al. Bioinformatics 2012).

ADD COMMENTlink written 5.5 years ago by Alf450
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2623 users visited in the last hour