Question: From Phased File Formats To Vcf
0
gravatar for aleka
6.7 years ago by
aleka110
United Kingdom
aleka110 wrote:

I need to convert phased data (map and haplotype file) from the Hapmap Phase II data to vcf files. Are you familiar with any software that makes the conversion?

• 2.0k views
ADD COMMENTlink modified 6.0 years ago by amin.sadvance0 • written 6.7 years ago by aleka110
1
gravatar for Zhaorong
6.7 years ago by
Zhaorong1.3k
State College, PA
Zhaorong1.3k wrote:

You may want to take a look at the GATK VariantsToVCF tool: http://www.broadinstitute.org/gatk/gatkdocs/org_broadinstitute_sting_gatk_walkers_variantutils_VariantsToVCF.html

ADD COMMENTlink written 6.7 years ago by Zhaorong1.3k
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