How to average DESeq2’s median of ratios from replications
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3.0 years ago

Dear all,

In DESeq2, DESeq2 used the median of ratios for normalization count, instead of CPM and TPM I have three replication for EMT and EWT. Is it possible to average EMT1,2,3 to represent one normalization count number?

Thanks in advance

Best regards,

crossed post:https://support.bioconductor.org/p/9136780/

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Deseq2 • 433 views
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