Differences between gene expression expressed as z-score or log2 values in Allen Brain Atlas
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2.9 years ago
c.nunez • 0

Hi everyone,

This is a question from a complete beginner on this matter.

In the Allen Brain Atlas website, why is that log2 values are sometimes very different even for similar z-score values? For example:

I noticed that log2 values are quite stable within a given probe, while z-score values are more stable between probes. Is this because they are normalized by different factors?

Which score would be better to use if I want to compare expression differences between genes?

Thank you.

log2 expression allenatlas z-score • 412 views
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