how to annotate mapping peaks within a defined genomic region?
0
0
Entering edit mode
7 months ago
tianshenbio ▴ 120

I have some small RNA seq data that I have mapped to the genome. Using a software, I annotated some big genomic loci (~1kb) where 25-32bp small piRNA reads are produced, in bed format. So within these loci there are multiple 25-32bp mapping peaks. Is there a tool I can use to get all the genomic coordinates of these peaks, in bed format?

piRNA genome RNA-seq annotation • 177 views
ADD COMMENT

Login before adding your answer.

Traffic: 2863 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6