Downloading data from 1000Genomes

0

Entering edit mode

2.9 years ago

peter ▴ 20

I need to download vcf files for all chromosomes from 1000Genomes from the following link:

If you click on '1000 Genomes on GRCh38' there are some vcf files for some chromosomes but some files are tbi which I understand is the index file for vcf files. So how can I use tbi file to download vcf file for a given chromosome for example chromosome 1. Chromosome 1 has tbi file but not the corresponding vcf file. Insights will be appreciated.

1000Genomes vcf • 835 views

ADD COMMENT • link updated 2.9 years ago by zx8754 11k • written 2.9 years ago by peter ▴ 20

1

Entering edit mode

Filtering on "Variants" gives you 46 files, 23 *.vcf.gz, and 23 *.vcf.gz.tbi.

ADD REPLY • link 2.9 years ago by zx8754 11k

0

Entering edit mode

Thank you zx8754. I figured it out :)

ADD REPLY • link 2.9 years ago by peter ▴ 20

0

Entering edit mode

Feel free to share your solution below as an answer.

ADD REPLY • link 2.9 years ago by zx8754 11k

Login before adding your answer.