Ranking treatment replicates from differential expression
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3 months ago

I have a set of ~100 features that are differentially expressed between conditions from deseq2. I'm interested in developing some kind of score to rank future samples based on expression of these or a subset of these features.

I'd like to understand the variability in these current samples for this set of differentially expressed features.

What would be the best way to score samples for this set of putative biomarkers?

differential expression • 164 views
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You could try singscore in R.

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