TCGA WXS positions covered
0
0
Entering edit mode
10 weeks ago
s.cleary12 • 0

Hi all,

I am currently analysing TCGA WXS data and I need to find the number of positions that have been captured for each individual sample. It would also be useful to know the total number of positions covered to a sufficient depth eg 30X or 100X. Does anyone know if this information is already available anywhere? I know I can calculate it using the BAM files. However, downloading and processing those files will take a lot of time (and space) and I am hoping to avoid this.

Thanks in advance for your help.

WXS TCGA coverage • 99 views
ADD COMMENT

Login before adding your answer.

Traffic: 1626 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6