Deleted:How to write design and contrast in DESeq2 to find the up-regulated genes where the design have interactions
0
0
Entering edit mode
2.7 years ago
hans ▴ 20

Hello I have the following design in DESeq2: ~GT+TP+TP:GT . GT has two levels (K,W) . TP has two levels (0,2). I am looking for the genes that are up-regulated in samples where GT=W and TP=2. How do I define the contrast that these genes will have the highest log2FC. Thank you

Diffrential RNASEQ DESeq2 expression • 331 views
ADD COMMENT
This thread is not open. No new answers may be added
Traffic: 2224 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6