Entering edit mode
2.6 years ago
Mais
•
0
Hi guys,
How can I check the plots individually, when I run the ConsensusClusterPlus command they are generated above each other very fast and end up with Tracking plot, I cant find them anywhere else, I tried to generate them as PDFs or as png but nothing worked.
example=tempdir("F:/Projects/NSCLC Brain met/Liquid biopsy/Plasma/Olink/consensus cluster analysis/")
results = ConsensusClusterPlus(d=data,maxK=6,reps=100,pItem=0.8,pFeature=1,title="example",clusterAlg="hc",distance="pearson",seed=1262118388.71279,plot="png")
Another question is where do I put the number of samples I am clustering is it the reps?
Many thanks!
