How to parse Illumina Bead Array Non-Normalized Output File in R
Entering edit mode
7 months ago
Anthony • 0

enter image description here

I am new to processing microarray data. I've been given this output file that is non-normalized and I would like to process the output.

The format is listed in the image above. There are 4 columns for each sample with SAMPLEID.AVG_Signal, SAMPLEID.Detection Pval, SAMPLEID.Avg_NBEADS, and SAMPLEID.BEAD_STDERR.

I've looked at a lot of posts on here but I haven't found posts that deal with this format. I am trying to process this data in R but I am unsure how.

Has anyone dealt with this before and what was your solution?

Thank you in advance.

lumi Illumina Bioconductor R Microarray • 163 views

Login before adding your answer.

Traffic: 852 users visited in the last hour
Help About
Access RSS

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6