Problem in plotting graph or Graphics Device in the RStudio

Question

[Abdou-samad]

Hello Everyone. I'm trying to plot an Enrichissement graphic via "TCGAanalyze_EAcomplete" But when I run, nothing shows up. The console displays "null device 1" Please anyone could hepl me to fix this error. Thank you very much. below is the script I used

TCGAvisualize_EAbarplot(tf = rownames(ansEA$ResBP), GOBPTab = ansEA$ResBP, GOCCTab = ansEA$ResCC, GOMFTab = ansEA$ResMF, PathTab = ansEA$ResPat, nRGTab = Genelist, nBar = 10)

And I get the error : null device 1 ```

Answer 1

[Papyrus]

The function is generating and saving the plot as a PDF file in your working directory, instead of showing it to you. If you want the plot in R, you have to change the filename argument to filename = NULL. (see the manual).

[Abdou-samad]

Thank you very much