Custom Kraken2 db
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5 months ago
valentinavan ▴ 30

Hi,

I have created a custom kraken2 database but it produced an unmapped.txt file with a list of accession numbers.

1) How do I find the taxa that have been included in this created db?

2) Is there a way to overcome this issue? For example, is there another way to include these taxa?

3) A better alignment tool that allows the creation of custom db for metagenomic data

Thanks!

database metagenomics kraken2 • 199 views
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